Schedule

An example schedule.

Day -1
Participants arrive via shuttle bus from PWM, or their own transportation
Participant check-in

Day 1
Morning
Introduction
Introduction to Single Cell Genomics
Tour of SCGC
Jupyterhub Orientation

Afternoon
Participant Research Symposium

Day 2
Morning
Introduction to GORG and SCGC’s QC Workflows
Comparison of SAGs and MAGs

Afternoon
Quality Controls for the GORG-Dark Collection
QC Exploration

Day 3
Morning
Introduction to Read Classification using SAGs
The GORG-classifier software tutorial
Exploring GORG-classifier outputs for GORG-Dark

Afternoon
Other methods for metagenome integration

Day 4
Morning
Metabolic annotation
Annotation of biosynthetic gene clusters

Afternoon
Viral Signals within Microbial SAGs

Day 5
Morning
Data visualization discussions

Afternoon
Group and independent work

Day 6
Participant check-out
Departure via shuttle to PWM or their own transportation